Cleanroom Design Checklist: A Comprehensive Guide

Table of Contents

Designing a cleanroom is not just about creating a sterile space—it’s about precision, control, and compliance. Whether you’re building a Class 100 environment for microelectronics or an ISO 7 suite for pharmaceutical packaging, every detail—from airflow patterns to gowning procedures—matters.

This checklist is a comprehensive guide for engineers, facility managers, and cleanroom planners. It breaks down the essential aspects of cleanroom design, helping you build a facility that meets regulatory standards, operational needs, and long-term performance requirements.

1. Determine Cleanroom Classification & Purpose

Start by identifying the cleanroom’s intended use and corresponding cleanliness level. ISO classifications (ISO 5 to ISO 8) define the maximum allowable particle counts per cubic meter. The classification impacts the entire design, from air change rates to filtration and construction materials.

Typical examples:

  • ISO 5 (Class 100): semiconductor lithography, aseptic pharmaceutical filling

  • ISO 7–8: medical device packaging, electronics assembly

2. Plan the Layout & Flow

A well-planned layout ensures logical movement of people, materials, and equipment while minimizing contamination risks. Define:

  • Entry/exit zones for personnel and materials

  • Airlocks and gowning rooms

  • Directional flow from “dirty” to “clean” zones

  • Placement of mechanical rooms and emergency exits

Use pressure cascades to ensure that cleaner areas maintain higher positive pressure than adjacent lower-classified spaces.

3. Build the Structural Envelope

The cleanroom envelope should support easy cleaning and contamination control:

  • Walls and ceilings: made from smooth, non-shedding, chemical-resistant materials like coated steel, aluminum, or FRP panels

  • Windows: flush-mounted and sealed for visibility without compromising pressure

  • Doors: interlocked where needed, with airtight seals and minimal gaps

4. Choose Proper Flooring & Surface Finishes

Surfaces should be durable, easy to disinfect, and minimize particle accumulation:

  • Flooring: seamless options like epoxy or heat-welded vinyl are standard

  • Coved edges: floor-to-wall junctions should be curved to eliminate corners

  • Finishes: resistant to disinfectants and non-porous to prevent microbial growth

5. Design HVAC & Filtration Systems

Cleanroom HVAC systems are designed not only for comfort but also for airborne particulate control. Key factors include:

  • Air changes per hour (ACH): varies by classification (e.g., >250 ACH for ISO 5)

  • HEPA/ULPA filters: installed in terminal or fan filter units to remove 99.97%+ of 0.3 μm particles

  • Pressure differentials: maintain cascading pressures between cleanroom zones

  • Temperature and humidity control: stable levels are critical for certain materials and processes

6. Implement Gowning Protocols & Entry Control

Personnel are one of the biggest sources of contamination. Entry design should include:

  • Gowning areas sized based on peak occupancy

  • Air showers to blow off loose particles

  • Clear signage and SOPs to guide the sequence: hand wash → don gown → step into clean zone

7. Plan for Material Transfer

Materials entering or exiting cleanrooms must follow controlled pathways:

  • Pass-through cabinets for small items

  • Roll-up doors or cart airlocks for equipment or bulk materials

  • Interlock systems to prevent both doors from opening at once

This ensures cleanroom integrity and reduces risks of contamination from high-traffic areas.

8. Coordinate Utilities & Equipment Integration

All infrastructure must be compatible with cleanroom operations:

  • Electrical: recessed, sealed outlets; surge protection; emergency backup

  • Lighting: uniform, shadow-free, and sealed to avoid dust collection

  • Equipment: must be low-shedding and positioned for accessibility and cleaning

Utilities should be routed in ceiling plenums or chases, away from airflow-critical areas.

9. Establish Monitoring & Validation Systems

To maintain regulatory compliance, the cleanroom must be validated and continuously monitored:

  • Particle counters, pressure gauges, and humidity sensors should be installed at key locations

  • Conduct regular IQ/OQ/PQ validation during setup and periodically thereafter

  • Develop SOPs for responding to excursions or deviations

Logging and alarm systems are crucial for audit trails and operational safety.

10. Design Cleaning Protocols & Contamination Control

Routine cleaning is essential for maintaining cleanroom classification:

  • Assign dedicated cleaning tools and materials

  • Establish schedules for daily, weekly, and monthly cleaning tasks

  • Use disinfectants appropriate for surface compatibility and microbial control

  • Train personnel on contamination control techniques, including wiping methods and garment handling

Summary Table

Checklist Category Key Considerations
Classification & Purpose ISO standard, industry-specific needs
Layout & Flow People/material zoning, directional airflow
Structural Envelope Sealed walls, ceilings, doors, windows
Surface Finishes Epoxy/vinyl flooring, coved edges, chemical resistance
HVAC & Filtration HEPA filters, ACH, temperature/humidity, pressure control
Gowning & Entry Control Air showers, gowning rooms, donning sequence
Material Transfer Pass-throughs, interlocks, transfer procedures
Utilities & Equipment Cleanroom-compatible, sealed, serviceable
Monitoring & Validation Sensors, IQ/OQ/PQ, real-time logging
Cleaning Protocols SOPs, disinfectant selection, tool segregation
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